Title: | Read Excel Files |
Version: | 1.4.5 |
Description: | Import excel files into R. Supports '.xls' via the embedded 'libxls' C library https://github.com/libxls/libxls and '.xlsx' via the embedded 'RapidXML' C++ library https://rapidxml.sourceforge.net/. Works on Windows, Mac and Linux without external dependencies. |
License: | MIT + file LICENSE |
URL: | https://readxl.tidyverse.org, https://github.com/tidyverse/readxl |
BugReports: | https://github.com/tidyverse/readxl/issues |
Depends: | R (≥ 3.6) |
Imports: | cellranger, tibble (≥ 2.0.1), utils |
Suggests: | covr, knitr, rmarkdown, testthat (≥ 3.1.6), withr |
LinkingTo: | cpp11 (≥ 0.4.0), progress |
VignetteBuilder: | knitr |
Config/Needs/website: | tidyverse/tidytemplate, tidyverse |
Config/testthat/edition: | 3 |
Encoding: | UTF-8 |
Note: | libxls v1.6.3 c199d13 |
RoxygenNote: | 7.3.2 |
NeedsCompilation: | yes |
Packaged: | 2025-03-07 07:25:57 UTC; jenny |
Author: | Hadley Wickham |
Maintainer: | Jennifer Bryan <jenny@posit.co> |
Repository: | CRAN |
Date/Publication: | 2025-03-07 17:10:02 UTC |
readxl: Read Excel Files
Description
Import excel files into R. Supports '.xls' via the embedded 'libxls' C library https://github.com/libxls/libxls and '.xlsx' via the embedded 'RapidXML' C++ library https://rapidxml.sourceforge.net/. Works on Windows, Mac and Linux without external dependencies.
Author(s)
Maintainer: Jennifer Bryan jenny@posit.co (ORCID)
Authors:
Hadley Wickham hadley@posit.co (ORCID)
Other contributors:
Posit, PBC (Copyright holder of all R code and all C/C++ code without explicit copyright attribution) [copyright holder, funder]
Marcin Kalicinski (Author of included RapidXML code) [contributor, copyright holder]
Komarov Valery (Author of included libxls code) [contributor, copyright holder]
Christophe Leitienne (Author of included libxls code) [contributor, copyright holder]
Bob Colbert (Author of included libxls code) [contributor, copyright holder]
David Hoerl (Author of included libxls code) [contributor, copyright holder]
Evan Miller (Author of included libxls code) [contributor, copyright holder]
See Also
Useful links:
Report bugs at https://github.com/tidyverse/readxl/issues
Specify cells for reading
Description
The range
argument of read_excel()
provides many ways to limit the read
to a specific rectangle of cells. The simplest usage is to provide an
Excel-like cell range, such as range = "D12:F15"
or
range ="R1C12:R6C15"
. The cell rectangle can be specified in various other ways,
using helper functions. You can find more examples at the
sheet geometry
vignette. In all cases, cell range processing is handled by the
cellranger package, where you can find full documentation for
the functions used in the examples below.
See Also
The cellranger package has full documentation on cell specification and offers additional functions for manipulating "A1:D10" style spreadsheet ranges. Here are the most relevant:
Examples
path <- readxl_example("geometry.xls")
## Rows 1 and 2 are empty (as are rows 7 and higher)
## Column 1 aka "A" is empty (as are columns 5 of "E" and higher)
# By default, the populated data cells are "shrink-wrapped" into a
# minimal data frame
read_excel(path)
# Specific rectangle that is subset of populated cells, possibly improper
read_excel(path, range = "B3:D6")
read_excel(path, range = "C3:D5")
# Specific rectangle that forces inclusion of unpopulated cells
read_excel(path, range = "A3:D5")
read_excel(path, range = "A4:E5")
read_excel(path, range = "C5:E7")
# Anchor a rectangle of specified size at a particular cell
read_excel(path, range = anchored("C4", dim = c(3, 2)), col_names = FALSE)
# Specify only the rows
read_excel(path, range = cell_rows(3:5))
## is equivalent to
read_excel(path, range = cell_rows(c(3, 5)))
# Specify only the columns by column number or letter
read_excel(path, range = cell_cols("C:D"))
read_excel(path, range = cell_cols(2))
# Specify exactly one row or column bound
read_excel(path, range = cell_rows(c(5, NA)))
read_excel(path, range = cell_rows(c(NA, 4)))
read_excel(path, range = cell_cols(c("C", NA)))
read_excel(path, range = cell_cols(c(NA, 2)))
# General open rectangles
# upper left = C4, everything else unspecified
read_excel(path, range = cell_limits(c(4, 3), c(NA, NA)))
# upper right = D4, everything else unspecified
read_excel(path, range = cell_limits(c(4, NA), c(NA, 4)))
Determine file format
Description
Determine if files are xls or xlsx (or from the xlsx family).
excel_format(guess = TRUE)
is used by read_excel()
to
determine format. It draws on logic from two lower level functions:
-
format_from_ext()
attempts to determine format from the file extension. -
format_from_signature()
consults the file signature or "magic number".
File extensions associated with xlsx vs. xls:
xlsx:
.xlsx
,.xlsm
,.xltx
,.xltm
xls:
.xls
File signatures (in hexadecimal) for xlsx vs xls:
xlsx: First 4 bytes are
50 4B 03 04
xls: First 8 bytes are
D0 CF 11 E0 A1 B1 1A E1
Usage
excel_format(path, guess = TRUE)
format_from_ext(path)
format_from_signature(path)
Arguments
path |
Path to the xls/xlsx file. |
guess |
Logical. If the file extension is absent or not recognized, this controls whether we attempt to guess format based on the file signature or "magic number". |
Value
Character vector with values "xlsx"
, "xls"
, or NA
.
Examples
files <- c(
"a.xlsx",
"b.xls",
"c.png",
file.path(R.home("doc"), "html", "logo.jpg"),
readxl_example("clippy.xlsx"),
readxl_example("deaths.xls")
)
excel_format(files)
List all sheets in an excel spreadsheet
Description
The list of sheet names is especially useful when you want to iterate over
all of the sheets in a workbook. The readxl Workflows article
provides several worked examples of this, showing how to combine readxl with
other packages in the tidyverse, such as purrr, or with base R functions like
lapply()
.
Usage
excel_sheets(path)
Arguments
path |
Path to the xls/xlsx file. |
Examples
excel_sheets(readxl_example("datasets.xlsx"))
excel_sheets(readxl_example("datasets.xls"))
# To load all sheets in a workbook, use lapply()
path <- readxl_example("datasets.xls")
lapply(excel_sheets(path), read_excel, path = path)
Read xls and xlsx files
Description
Read xls and xlsx files
read_excel()
calls excel_format()
to determine if path
is xls or xlsx,
based on the file extension and the file itself, in that order. Use
read_xls()
and read_xlsx()
directly if you know better and want to
prevent such guessing.
Usage
read_excel(
path,
sheet = NULL,
range = NULL,
col_names = TRUE,
col_types = NULL,
na = "",
trim_ws = TRUE,
skip = 0,
n_max = Inf,
guess_max = min(1000, n_max),
progress = readxl_progress(),
.name_repair = "unique"
)
read_xls(
path,
sheet = NULL,
range = NULL,
col_names = TRUE,
col_types = NULL,
na = "",
trim_ws = TRUE,
skip = 0,
n_max = Inf,
guess_max = min(1000, n_max),
progress = readxl_progress(),
.name_repair = "unique"
)
read_xlsx(
path,
sheet = NULL,
range = NULL,
col_names = TRUE,
col_types = NULL,
na = "",
trim_ws = TRUE,
skip = 0,
n_max = Inf,
guess_max = min(1000, n_max),
progress = readxl_progress(),
.name_repair = "unique"
)
Arguments
path |
Path to the xls/xlsx file. |
sheet |
Sheet to read. Either a string (the name of a sheet), or an
integer (the position of the sheet). Ignored if the sheet is specified via
|
range |
A cell range to read from, as described in cell-specification.
Includes typical Excel ranges like "B3:D87", possibly including the sheet
name like "Budget!B2:G14", and more. Interpreted strictly, even if the
range forces the inclusion of leading or trailing empty rows or columns.
Takes precedence over |
col_names |
|
col_types |
Either |
na |
Character vector of strings to interpret as missing values. By default, readxl treats blank cells as missing data. |
trim_ws |
Should leading and trailing whitespace be trimmed? |
skip |
Minimum number of rows to skip before reading anything, be it
column names or data. Leading empty rows are automatically skipped, so this
is a lower bound. Ignored if |
n_max |
Maximum number of data rows to read. Trailing empty rows are
automatically skipped, so this is an upper bound on the number of rows in
the returned tibble. Ignored if |
guess_max |
Maximum number of data rows to use for guessing column types. |
progress |
Display a progress spinner? By default, the spinner appears
only in an interactive session, outside the context of knitting a document,
and when the call is likely to run for several seconds or more. See
|
.name_repair |
Handling of column names. Passed along to
|
Value
A tibble
See Also
cell-specification for more details on targetting cells with the
range
argument
Examples
datasets <- readxl_example("datasets.xlsx")
read_excel(datasets)
# Specify sheet either by position or by name
read_excel(datasets, 2)
read_excel(datasets, "mtcars")
# Skip rows and use default column names
read_excel(datasets, skip = 10, col_names = FALSE)
# Recycle a single column type
read_excel(datasets, col_types = "text")
# Specify some col_types and guess others
read_excel(
readxl_example("deaths.xlsx"),
skip = 4, n_max = 10, col_names = TRUE,
col_types = c("text", "text", "guess", "guess", "guess", "guess")
)
# Accomodate a column with disparate types via col_type = "list"
df <- read_excel(readxl_example("clippy.xlsx"), col_types = c("text", "list"))
df
df$value
sapply(df$value, class)
# Limit the number of data rows read
read_excel(datasets, n_max = 3)
# Read from an Excel range using A1 or R1C1 notation
read_excel(datasets, range = "C1:E7")
read_excel(datasets, range = "R1C2:R2C5")
# Specify the sheet as part of the range
read_excel(datasets, range = "mtcars!B1:D5")
# Read only specific rows or columns
read_excel(datasets, range = cell_rows(102:151), col_names = FALSE)
read_excel(datasets, range = cell_cols("B:D"))
# Get a preview of column names
names(read_excel(readxl_example("datasets.xlsx"), n_max = 0))
# exploit full .name_repair flexibility from tibble
# "universal" names are unique and syntactic
read_excel(
readxl_example("deaths.xlsx"),
range = "arts!A5:F15",
.name_repair = "universal"
)
# specify name repair as a built-in function
read_excel(readxl_example("clippy.xlsx"), .name_repair = toupper)
# specify name repair as a custom function
my_custom_name_repair <- function(nms) tolower(gsub("[.]", "_", nms))
read_excel(
readxl_example("datasets.xlsx"),
.name_repair = my_custom_name_repair
)
# specify name repair as an anonymous function
read_excel(
readxl_example("datasets.xlsx"),
sheet = "chickwts",
.name_repair = ~ substr(.x, start = 1, stop = 3)
)
Get path to readxl example
Description
readxl comes bundled with some example files in its inst/extdata
directory. This function make them easy to access.
Usage
readxl_example(path = NULL)
Arguments
path |
Name of file. If |
Examples
readxl_example()
readxl_example("datasets.xlsx")
Determine whether to show progress spinner
Description
By default, readxl displays a progress spinner unless
one of the following is TRUE
:
The spinner is explicitly disabled by setting
options(readxl.show_progress = FALSE)
.The code is run in a non-interactive session (
interactive()
isFALSE
).The code is run by knitr / rmarkdown.
The code is run in an RStudio notebook chunk. readxl uses the progress package under-the-hood and therefore is also sensitive to any options that it consults.
Usage
readxl_progress()